TAP PcG_MSI in Capsella rubella

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

WD40
CAF1C_H4-bd
FIE_clipped_for_HMM

(Domain names are clickable)



List of proteins (6)

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namename additionClick button to show/hide sequence: Download sequence?
Carubv10004628mpacid=20894634 transcript=Carubv10004628m locus=Carubv10004628m.g ID=Carubv10004628m.v1.0 annot-version=v1.0
Carubv10004773mpacid=20895141 transcript=Carubv10004773m locus=Carubv10004773m.g ID=Carubv10004773m.v1.0 annot-version=v1.0
Carubv10013613mpacid=20897699 transcript=Carubv10013613m locus=Carubv10013613m.g ID=Carubv10013613m.v1.0 annot-version=v1.0
Carubv10013791mpacid=20901042 transcript=Carubv10013791m locus=Carubv10013791m.g ID=Carubv10013791m.v1.0 annot-version=v1.0
Carubv10016223mpacid=20899009 transcript=Carubv10016223m locus=Carubv10016223m.g ID=Carubv10016223m.v1.0 annot-version=v1.0
Carubv10028610mpacid=20913862 transcript=Carubv10028610m locus=Carubv10028610m.g ID=Carubv10028610m.v1.0 annot-version=v1.0
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum